Protein Information

Protein ZmDOF42
ZmDOF42 is a protein in the C2C2-Dof family.
Information
TF Name:	ZmDOF42
Species:	Maize
TF Family:	C2C2-Dof
Gene Name(Synonym):	DOF42
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmDOF42 is a protein in the C2C2-Dof family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF02701
Zm00001eb253280_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d017900	DAPseq	sequence	fimo	position
Zm00001d017900	DAPseq	sequence	fimo	position
Zm00001d017900	ChIPseq	sequence	fimo	position
Zm00001d017900	PChIPseq	sequence	fimo	position

Interactions where ZmDOF42 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmDOF42 is the target
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There are 170 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb253280_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MQEFQSIPGLAGRLFGGAAAPGDLRRAQAAQHGPGGARCGGASPAAPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSC
RRYWTKGGVLRNVPVGGGCRKAKRASPSASASASSPASSSAPSTPASADAAKNPRRASASPRSNSGSASPTAAAATTPTP
TDPSTSATPSSNGVAFTGSHHSSNPFSTIDVAAAPPAPIFADQAAALASLFAPPPPPPLPVFSFAAAQPKEEEAPTNSEL
QQHLAAQAAPSSSVSEDIMAPFASLDAAGIFELGDAASAAAYWSAGSCWADVQDPSLYLP

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF02701
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Nucleotide Sequence
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TCCATCGAGTGTATCGTGTACTTGT...

GRMZM2G394941_T01 from maize genome v3

Related TFome: pUT6186

Amino Acid Sequence
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Nucleotide Sequence
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CGGTGTGTGATGCAGAGGCGATGCC...

Zm00001d017900_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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ATGCAGGAGTTCCAGTCCATCCCTG...

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Protein ZmDOF42

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmDOF42 is the regulator

Interactions where ZmDOF42 is the target
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Zm00001eb253280_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G394941_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d017900_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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